Installation

Requirements

This package was tested for Python 3.7 - 3.11 on ubuntu, macos and windows. It depends on the kmedoids python package. If you are using windows or macos, you may need to first install Rust/Cargo with:

conda install -c conda-forge rust

If this does not work, please try to install Cargo from source:

git clone https://github.com/rust-lang/cargo
cd cargo
cargo build --release

For further information on the kmedoids package, please visit this page.

All other required packages are automatically installed if installation is done via pip.

Install Options

The installation of the package is done via pip. Note: if you are using conda, first install pip with: conda install pip.

PyPI install:

pip install fgclustering

Installation from source:

git clone https://github.com/HelmholtzAI-Consultants-Munich/fg-clustering.git

• Installation as python package (run inside directory):

  pip install .
  

• Development Installation as python package (run inside directory):

  pip install -e . [dev]